BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005A02LP1|AL425306
(997 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1724 1846 0.0
3x_Contig234 773 0.0
>3x_Contig1724
Length = 20938
Score = 1846 bits (922), Expect = 0.0
Identities = 975/996 (97%), Gaps = 5/996 (0%)
Strand = Plus / Plus
Query: 1 atcggtggtgcattcttaaactggcagatctgcgatcaatatttgaagcaggattcgggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12095 atcggtggtgcattcttaaactggcagatctgcgatcaatatttgaagcaggattcgggc 12154
Query: 61 aaatcaacgaaaatctggagggatgccactgaatggctacccaacttcaagaatagcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12155 aaatcaacgaaaatctggagggatgccactgaatggctacccaacttcaagaatagcatg 12214
Query: 121 ctgcaagtttctccgattgaattggatgctaattatgacgtggctcctcattaccaacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12215 ctgcaagtttctccgattgaattggatgctaattatgacgtggctcctcattaccaacat 12274
Query: 181 atggtgtcaccaatggacttgaccaaaaatttcctactcgataagaaaactctcaccttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12275 atggtgtcaccaatggacttgaccaaaaatttcctactcgataagaaaactctcaccttc 12334
Query: 241 actaacaaacagctatacaccattggagaactcttgttcaagccagtcatacacgtaagt 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 12335 actaacaaacagctatacaccattggagaactcttgttcaagccagtgatacacgtaagt 12394
Query: 301 macaatgcaaacggagatgtagaaatggcagatgtcaatgacatagagaaaaagccacat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12395 aacaatgcaaacggagatgtagaaatggcagatgtcaatgacatagagaaaaagccacat 12454
Query: 361 ccggagaaattaattggggtcattggattgatcagagcatgcatccaaagtttattaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12455 ccggagaaattaattggggtcattggattgatcagagcatgcatccaaagtttattaaat 12514
Query: 421 ggtgtcaatgcaatgtccaccgcag-cagtaacactacagggtcctccactacgacgggt 479
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 12515 ggtgtcaatgcaatgtccaccgcaggcagtaacactacagggtcctccactacgacgggt 12574
Query: 480 aatgcttcctcgggcaaccaaagcaacaacaacgaggatacgaacatcccaacgcacagc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12575 aatgcttcctcgggcaaccaaagcaacaacaacgaggatacgaacatcccaacgcacagc 12634
Query: 540 tacacttctgaacaactacaaagtctactgcttacgaacattctagtgacaggaagtacc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12635 tacacttctgaacaactacaaagtctactgcttacgaacattctagtgacaggaagtacc 12694
Query: 600 tcgaacattcagggtttagagcaaagaatattgaatgacgtttcagtctccctaaacgat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12695 tcgaacattcagggtttagagcaaagaatattgaatgacgtttcagtctccctaaacgat 12754
Query: 660 ctaaccamagtgaggcctaagatcmttttcaaamagaccaaattagacagaaacttccaa 719
||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 12755 ctaaccacagtgaggcctaagatccttttcaaacagaccaaattagacagaaacttccaa 12814
Query: 720 tcatggcaatctgcaacaaccttatgcagamtaccgttgcgcgaatmgttacatgcgtkg 779
|||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |
Sbjct: 12815 tcatggcaatctgcaacaaccttatgcagactaccgttgcgcgaatcgttacatgcgtgg 12874
Query: 780 gaatctatmgaatgaatggcgatatccacctgccctacctctcactcaactggcagtata 839
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12875 gaatctatcgaatgaatggcgatatccacctgccctacctctcactcaactggcagtata 12934
Query: 840 aaaatataataatgtamgtaccggataatcttcaaacccaagaaaacttaaaccaaatag 899
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12935 aaaatataataatgtacgtaccggataatcttcaaacccaagaaaacttaaaccaaatag 12994
Query: 900 tattaatcmamgtgammggatmtggaatagtaattgcg-agaaggataatttagaggcgc 958
|||||||| | |||| |||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 12995 tattaatccacgtgaccggatctggaatagtaattgcgaagaaggataatttagaggcgc 13054
Query: 959 tgatmc-tttcaag-aaaggta-caaaatagtaaga 991
|||| | ||||||| ||||||| |||||||||||||
Sbjct: 13055 tgatccttttcaagaaaaggtaccaaaatagtaaga 13090
>3x_Contig234
Length = 1152
Score = 773 bits (386), Expect = 0.0
Identities = 394/402 (98%)
Strand = Plus / Minus
Query: 499 aaagcaacaacaacgaggatacgaacatcccaacgcacagctacacttctgaacaactac 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1152 aaagcaacaacaacgaggatacgaacatcccaacgcacagctacacttctgaacaactac 1093
Query: 559 aaagtctactgcttacgaacattctagtgacaggaagtacctcgaacattcagggtttag 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 aaagtctactgcttacgaacattctagtgacaggaagtacctcgaacattcagggtttag 1033
Query: 619 agcaaagaatattgaatgacgtttcagtctccctaaacgatctaaccamagtgaggccta 678
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1032 agcaaagaatattgaatgacgtttcagtctccctaaacgatctaaccacagtgaggccta 973
Query: 679 agatcmttttcaaamagaccaaattagacagaaacttccaatcatggcaatctgcaacaa 738
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 agatccttttcaaacagaccaaattagacagaaacttccaatcatggcaatctgcaacaa 913
Query: 739 ccttatgcagamtaccgttgcgcgaatmgttacatgcgtkggaatctatmgaatgaatgg 798
||||||||||| ||||||||||||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 912 ccttatgcagactaccgttgcgcgaatcgttacatgcgtgggaatctatcgaatgaatgg 853
Query: 799 cgatatccacctgccctacctctcactcaactggcagtataaaaatataataatgtamgt 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 852 cgatatccacctgccctacctctcactcaactggcagtataaaaatataataatgtacgt 793
Query: 859 accggataatcttcaaacccaagaaaacttaaaccaaatagt 900
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 accggataatcttcaaacccaagaaaacttaaaccaaatagt 751
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5823
Number of Sequences: 1807
Number of extensions: 5823
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 2
length of query: 997
length of database: 10,358,551
effective HSP length: 16
effective length of query: 981
effective length of database: 10,329,639
effective search space: 10133375859
effective search space used: 10133375859
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.6 bits)